NGS data analysis

Merge paired-end Illumina sequencing reads from raw fastq files, collapse UMIs, cluster sequences and analyze enrichment

Chart showing antibody clustering of related antibody clones based on CDRH3 similarity

Scalable and fast NGS analysis software

Analyze antibody libraries and immune repertoires

Tools for data analysis on PipeBio

Import Fastq files and preprocess the data by merging paired-end reads
Collapse UMIs and use PCR error correction for accurate identification of antibody clones
Cluster multiple samples across experiments, identify homologous clonal groups
Calculate fold change and enrichment from immunization or biopanning experiments

Antibody biopanning sample overlap, enrichment and fold changes of clonal groups

Analyze large datasets fast

Analyze millions of sequences in parallel and obtain results quickly
Visualize and explore your data with intuitive charts

Biopanning experiment and cluster analysis of enriched antibodies

Wide support for sequencing platforms

Illumina sequencing, including MiSeq, NextSeq, NovaSeq
Oxford Nanopore long read sequencing
Parse Biosciences Single Cell Sequencing
10x Genomics, Single Cell barcoded sequences
PacBio long read sequencing

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Sequence database capabilities

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